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Table 1 Percent identities between NRs by domain

From: Analysis of C. elegans NR2E nuclear receptors defines three conserved clades and ligand-independent functions

 

% IDENTICAL

 
 

DBD

LBD

CeFAX-1 compared to:

CbFAX-1

100.0 %

69.0 %

BmFAX-1

94.0 %

17.2 %

PpFAX-1

93.0 %

10.4 %

DmUNF

92.9 %

17.3 %

HsPNR

83.3 %

16.4 %

CeNHR-67

65.5 %

12.7 %

HsTLX

66.7 %

15.5 %

CeNHR-111

57.1 %

25.0 %

DmHR83

64.3 %

16.4 %

DmUNF compared to:

BmFAX-1

89.3 %

45.9 %

PpFAX-1

86.0 %

12.1 %

HsPNR

83.3 %

50.8 %

CeNHR-67 compared to:

CbNHR-67

95.2 %

67.2 %

BmNHR-67

89.3 %

27.3 %

PpNHR-67

88.5 %

N/A

DmTLL

84.5 %

18.5 %

HsTLX

76.2 %

18.1 %

DmTLL compared to:

BmNHR-67

84.5 %

21.4 %

PpNHR-67

79.3 %

N/A

HsTLX

82.1 %

42.9 %

CeNHR-239 compared to:

CbNHR-239

90.5 %

54.9 %

PpNHR-239

68.7 %

N/A

DmHR83

60.7 %

8.5 %

SkXP2740657

64.3 %

8.6 %

DmUNF

57.1 %

8.5 %

  1. Amino acid sequences were aligned by ClustalW and evaluated using MEGA 5.0 software [35, 36]. Figures shown are the percent identical at each amino acid position in pairwise comparison, with unaligned regions deleted. Species abbreviations are given in Figure 1.