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Table 1 Complete dataset nucleotide substitution rate analyses

From: One misdated sequence of rabbit hemorrhagic disease virus prevents accurate estimation of its nucleotide substitution rate

 

Gene

Ntaxa

Substitution Rate (x10-3)*

RHDV TMRCA*

Corresponding Year*

RHDV

VP60

65

0.68

77

1932

  

(+AY269825)

(0.40-0.97)

(49–113)

(1896–1960)

RHDV

VP60

64

1.91

41

1968

  

(−AY269825)

(1.50-2.34)

(31–54)

(1955–1978)

RHDV

RdRp

31

1.90

62

1947

   

(1.25-2.55)

(37–89)

(1920–1972)

RHDV + RCV

VP60

104

1.01

90

1919

  

(+AY269825)

(0.63-1.44)

(55–142)

(1867–1954)

RHDV + RCV

VP60

103

2.24

45

1964

  

(−AY269825)

(1.61-2.95)

(33–60)

(1949–1976)

RHDV + RCV

RdRp

33

2.33

68

1941

   

(1.19-3.56)

(43–98)

(1911–1966)

  1. *Mean substitution rate, TMRCA, and corresponding year estimates are shown with upper and lower 95% HPD bounds.