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Table 3 Significant likelihood ratio tests of selection on transformer in Drosophila and the Tephritidae

From: Molecular evolution of Drosophila Sex-lethal and related sex determining genes

Test Line Alternative Ma Null Ma L df Pb Sitesc
1 a Nearly Neutral One ratio 13.75 1 0.0002 4
2 b Local relaxation Uniform Selection 5.39 2 0.02 0
3-D c Local relaxation Uniform Selection 64.89 2 < 0.0001 16
3-T d Local relaxation Uniform Selection 15.79 2 < 0.0001 1
  1. aAlternative and null models, see Additional File 6, Table S3 for more information on models and Log-likelihood values, bP value calculated from a χ2distribution, cnumber of sites significant in Bayesian post-hoc tests (P < 0.05). The alignment, after deleting gaps, was composed of 122 codons. Tests that we deemed weakly significant because Bayesian post-hoc tests did not detect relevant AA are shown in italics.