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Table 3 Tests of significance of migration and population size differences

From: Demographic histories of adaptively diverged riparian and non-riparian species of Ainsliaea(Asteraceae) inferred from coalescent analyses using multiple nuclear loci

 

A. linearis(1) -

A. oblonga(1) -

North (1) - South (2)

A. apiculata(2)

A. macroclinidioides(north) (2)

Model

log(P)

df

2LLR

P

log(P)

df

2LLR

P

log(P)

df

2LLR

P

θAθ1θ2m1 = m2

2.4387

1

6.4799

0.011

−3.7251

1

8.0867

0.004

4.9933

1

2.6006

0.107

θAθ1θ2m1m2=0

5.6746

1

0.008

0.929

−2.4051

1

5.4467

0.020

2.1984

1

7.7043

0.006

θAθ1θ2m1=0 m2

2.4387

1

6.4799

0.011

−1.9985

1

4.6336

0.031

5.7494

1

0.0043

0.948

θAθ1θ2m1=0 m2=0

2.4394

2

6.4784

0.039

−3.3128

2

7.2621

0.026

2.1981

2

7.7057

0.021

θAθ1=θ2m1m2

1.4532

1

8.4509

0.004

−2.6265

1

5.8896

0.015

5.5204

1

1.3799

0.240

θA=θ1=θ2m1m2

0.2299

2

10.8975

0.004

−6.3303

2

13.2971

0.001

4.156

2

1.4858

0.476

θAθ1=θ2m1=m2

1.4449

2

8.4674

0.014

−10.614

2

21.8637

0.000

4.7742

2

4.5953

0.100

θAθ1=θ2m1=0 m2=0

−5.1614

3

21.68

0.000

−145.77

3

292.18

0.000

0.9275

3

10.8436

0.013

θA=θ1=θ2m1=m2

0.178

3

11.0012

0.012

−10.805

3

22.2464

0.000

3.3505

3

4.8739

0.181

θA=θ1=θ2m1=0 m2=0

−34.912

4

81.1808

0.000

−279.85

4

560.328

0.000

−1.3107

4

18.0984

0.001

θA=θ1θ2m1m2

1.6998

1

7.9577

0.005

−3.4594

1

7.5554

0.006

4.8486

1

0.3983

0.528

θA=θ1θ2m1=m2

0.7965

2

9.7642

0.008

−4.5652

2

9.7669

0.008

4.0603

2

2.9642

0.227

θA=θ1θ2m1=0 m2=0

−34.889

3

81.1346

0.000

−270.87

3

542.386

0.000

−1.0241

3

12.4439

0.006

θ1θA=θ2m1m2

1.5984

1

8.1604

0.004

−3.9078

1

8.4522

0.004

4.6988

1

0.536

0.464

θ1θA=θ2m1=m2

0.4587

2

10.4398

0.005

−4.8235

2

10.2835

0.006

4.0149

2

3.1385

0.208

θ1θA=θ2m1=0 m2=0

−25.328

3

62.0126

0.000

−11.575

3

23.7873

0.000

1.1371

3

8.6762

0.034

  1. 16 nested models (no migration and equal population size) were compared to the full model (significant migration and different population sizes; θAθ1θ2m1m2).
  2. “log(P)” is the posterior probability of the model given data, “2LLR” = 2 × (Log(P)nested model-Log(P)full model), “df” is the difference in number of parameters between nested and full model, and the P-value is the probability of achieving the test statistic (2LLR) by chance under the null model. The models with P < 0.05 represent rejection of the models and they are indicated in boldface. θ1, θ2, θA are effective population sizes of population (1), population (2), and ancestral population, respectively. m1 and m2 are the gene flow from (2) to (1) and (1) to (2), respectively.