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Table 3 Correlation of difference in log-likelihood values with number of sequences per MSA

From: The origins of the evolutionary signal used to predict protein-protein interactions

 

SCC

P-value

SP50L_20p_POS

0.343

0.007

UP50L_20p_POS

0.584

0.000001

UP70L_20p_POS

0.697

5.96E-10

SP50L_20p_NEG

0.393

0.00001

UP50L_20p_NEG

0.665

1.51E-16

UP70L_20p_NEG

0.504

5.04E-09

  1. The abbreviations used are: SCC – spearman correlation coefficient, POS - Dataset of interacting proteins, NEG – Dataset of non-interacting proteins, 20p – The version of the dataset containing a maximum of 20% gapped columns.
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BMC Ecology and Evolution

ISSN: 2730-7182

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