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Table 1 The 127 gamma-gliadin sequences analysed in this study

From: Expansion of the gamma-gliadin gene family in Aegilops and Triticum

Species

Accession

Genome

N seq

N contigs (99%)

Genes

Pseudo-genes

Length (bp)

Genbank accession nr

Cloned in this study

        

T. monococcum

CGN10542

Am

23

5

4

1

759-939

JQ269804-JQ269808

Ae. caudata

к2255

C

50

12

9

3

909-948

JQ269703-JQ269716

Ae. comosa

к2272

M

32

5

3

2

887-909

JQ269717-JQ269721

Ae. uniaristata

к650

N

35

7

6

1

873-924

JQ269742-JQ269750

Ae. mutica

к1581

T

35

8

7

1

882-909

JQ269722-JQ269729

Ae. tauschii

к1368

D

32

4

4

0

879-897

JQ269789-JQ269792

Ae. umbellulata

к1588

U

36

10

5

5

873-928

JQ269730-JQ269741

Ae. speltoides

CGN10682

S

11

3

3

0

648, 909

JQ269774-JQ269778

Ae. speltoides

CGN10684

S

81

5

5

0

873-1089

JQ269751-JQ269757

Total cloned in this study

  

335

59

46

13

  

Already present in Genbank/EMBL/DDBJ (in August 2011)

Ae. searsii

  

9

3

3

0

  

Ae. bicornis

  

13

3

3

0

  

Ae. longissima

  

10

4

3

1

  

Ae. sharonensis

  

8

5

4

1

  

Ae. speltoides

  

11

3

3

0

  

Ae. tauschii

  

10

4

4

0

  

T. monococcum

  

30

14

13

1

  

T. urartu

  

14

5

4

1

  

Crithopsis delileana

  

2

2

2

0

  

Lophopyrum elongatum

  

16

14

8

6

  

Dasypyrum sp.

  

22

11

5

6

  

Total in Genbank/EMBL/DDBJ

  

145

68

52

16