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Table 3 ITS1 variation among 76 isolates of Thalassiosira rotula collected from around the globe

From: Molecular subdivision of the marine diatom Thalassiosira rotulain relation to geographic distribution, genome size, and physiology

Lineage

Sequence ID

n

Origin

Site #

BP Position

     

41

44

50

82

95

108

149

200

201

1

1

17

Vancouver Island (A and B)

2,3

A

G

C

C

C

A

-

G

G

1

4

2

Vancouver Island (A and B)

2,3

-

-

-

-

A/C

A/T

-

-

-

1

5

2

Queen Charlotte Islands, La Jolla, CA

1,5

-

-

-

-

-

-

C

-

-

2

2

11

Puget Sound, Queen Charlotte Islands

4,1

G/A

-

-

-

-

-

-

-

A

2

6

4

Puget Sound

4

G

-

-

-

-

-

-

-

G/A

3

3

38

Martha’s Vineyard, Narragansett Bay, Japan, Mediterranean, Scotland

6,7,8, 9,10,12

-

-

-

T

-

-

-

T

-

3

7

2

Mediterranean and Narragansett Bay

11,8

-

A

C/T

T

-

-

-

T

-

  1. This table includes only those sequences represented by >1 isolate. No singleton sequences are displayed. Base pairs indicated with a slash (eg. A/C) indicate ambiguous signals in sequencing, and thus the possible presence of two alleles at that position.
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BMC Ecology and Evolution

ISSN: 2730-7182

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