Skip to main content

Table 1 Description of site and isolates collected, including isolation success and genes sequenced from each site

From: Molecular subdivision of the marine diatom Thalassiosira rotulain relation to geographic distribution, genome size, and physiology

 

Site

Region

Origin

Date Collected

No. cells isolated (survived)

ITS1 sequences (#)

18S and 28S Sequences (#)

Lineage 1

Lineage 2

Lineage 3

Physiology

a.)

1

North Pacific

Queen Charlotte Islands, Canada 51.75°N, 131°W

5/17/2007

21 (18)

10

 

3

6

1

 

2

North Pacific

Vancouver Island (A), Canada 49.65°N, 127.44°W

5/13/2007

48 (41)

10

1

10

  

1

3

North Pacific

Vancouver Island (B). Canada 48.87°N, 125.89°W

5/13/2007

32 (30)

10

1

10

  

1

4

North Pacific

Puget Sound, USA 47.74°N, 122.42°W

5/12/2007

56 (56)

10

1

 

10

  

5

North Pacific

La Jolla, USA 32.85°N, 117.25°W (CCMP1018)

1968

NA

1

1

1

  

1

6

North Pacific

Seto Inland Sea, Japan 34.16°N, 133.33°E

2/2007

NA

5

1

  

5

1

 

7

North Atlantic

Martha’s Vineyard Coastal Observatory, USA 41.45°N, 70.56°W

11/3/2008

17 (15)

10

   

10

 

8

North Atlantic

Narragansett Bay, URI 41.53°N, 71.38°W

10/10/2008

24 (24)

10

   

10

 
 

1/8/2009

24 (21)

10

1

  

10

 
   

2/9/2009

48 (45)

10

   

10

 
   

6/26/2009

4 (2)

2

     

9

North Atlantic

Oban, Scotland 56.57°N, 5.43°W (CCAP1085_20)

2008

NA

1

1

  

1

 
 

10

Mediterranean Sea

Gulf of Naples, Italy 40.95°N, 14.25°E (CCAP1085_21)

2008

NA

1

1

  

1

1

11

Mediterranean Sea

Gulf of Naples, Italy 40.49°N, 14.15°E (CCMP1647)

11/12/2008

NA

1

1

  

1

 

12

Mediterranean Sea

Gulf of Naples, Italy 40.75°N, 14.33°E (CCMP3264)

1993

NA

1

1

  

1

1

b.)

13

North Atlantic

Iceland 60.92472°N, 27.005833°

5/22/2008

48 (29)

10

3

    
 

14

North Atlantic

Tromso, Norway 69.66°N, 18.96°E (CCMP986, 987)

8/1/1978

NA

2

1

    
 

15

Southern Ocean

McMurdo Sound77.83°S 163.00°E, Antarctica (CCMP1463, CCMP1462)

2/1/1991

NA

2

2

    
  1. Site numbers refer to map featured in Figure 1. Isolation number or isolation success number was not available for culture collection strains, nor for those isolated in Japan. Culture collection accession numbers are indicated in the “Origin" column. a) All T. rotula isolates, including number classified as 1, 2, or 3, number of isolates included in physiological experiments. b) Description of T. gravida isolates.