Table 2 Transposable Elements (TEs) discovered in the present study
Intron Fragments | Species | Transposable Elements (TEs) | |||||
|---|---|---|---|---|---|---|---|
| Â | Â | Species-specific | Orthologous | ||||
| Â | Â | TEs | Class | Length(bp) | TEs | Class | Length(bp) |
Cidea1 | Martes penanti | SINEC_b2 | SINE/tRNA-Lys | 192 | L1_Canid_ | LINE/L1 | 54-82 |
| Â | Mephitis mephitis | SINEC_b1 | SINE/tRNA-Lys | 188 | Â | Â | Â |
| Â | Meles meles | SINEC_b1 | SINE/tRNA-Lys | 194 | Â | Â | Â |
| Â | Arctonyx collaris | SINEC_b2 | SINE/tRNA-Lys | 194 | Â | Â | Â |
Coro1c-4 | Â | Â | Â | Â | Tigger12c | DNA/TcMar-Tigger | 56-59 |
| Â | Â | Â | Â | Â | MIRb | SINE/MIR | 93-112 |
Coro1c-5 | Lutra lutra | SINEC_b1 | SINE/tRNA-Lys | 187 | SINEC_old | SINE/tRNA-Lys | 104-107 |
| Â | Â | Â | Â | Â | L1ME4a | LINE/L1 | 65-67 |
Guca1b-3 | Â | Â | Â | Â | MIR | SINE/MIR | 58-63 |
Ociad1-4 | Mephitis mephitis | SINEC_b2 | SINE/tRNA-Lys | 268 | MIRc | SINE/MIR | 92-122 |
| Â | Martes flavigula/Martes zibellina/Gulo gulo/Martes foina/Martes amaricana/Martes penanti | SINEC_b1 | SINE/tRNA-Lys | 175-187 | Â | Â | Â |
Plod2-14 | Raccoon/Kinkajou | SINEC_b1 | SINE/tRNA-Lys | 192-195 | Kanga1a | DNA/TcMar-Tc2 | 129-188 |
| Â | Â | Â | Â | Â | Kanga1c | DNA/TcMar-Tc2 | 81-92 |
Ssr1-5 | Ailurus fulgens | SINEC_b1 | SINE/tRNA-Lys | 196 | Â | Â | Â |
Tbc1d7-6 | Â | Â | Â | Â | MIR | SINE/MIR | 134-195 |
Tinagl1-1 | Mephitis mephitis/Ailurus fulgens | MIR3 | SINE/MIR | 72-76 | MIR | SINE/MIR | 49-64 |
Tinagl1-3 | Â | Â | Â | Â | MIR | SINE/MIR | 85-87 |
Wasf1-3 | Â | Â | Â | Â | L2c | LINE/L2 | 85-90 |
Wasf1-6 | Â | Â | Â | Â | MER58A | DNA/hAT-Charlie | 197 |
Fgb-4 | Taxidea taxus | SINEC_b1 | SINE/tRNA-Lys | 199 | Â | Â | Â |
| Â | Lutra lutra | SINEC_b2 | SINE/tRNA-Lys | 187 | Â | Â | Â |
Fgb-7 | Mephitis mephitis | SINEC_b1 | SINE/tRNA-Lys | 193 | MIRb | SINE/MIR | 196-198 |
| Â | Mephitis mephitis | SINEC_b2 | SINE/tRNA-Lys | 193 | Â | Â | Â |
Ttr-1 | Â | Â | Â | Â | SINEC_b1 | SINE/tRNA-Lys | 166-193 |