Sequence type | Fragments name | TEs | Aligneda | Final datab | Parsimony-informative sites | Nucleotide Composition | Ti/Tv | Best fit model | Among-site Rate Variation | Pairwise Distance (%) | ||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  |  |  | A | T | G | C |  |  | I | α |  |
Nucear introns | Cidea-1 | YES | 1590 | 1134 | 343 | 0.308 | 0.240 | 0.230 | 0.222 | 1.5 | TrN+G | 0 | 0.9770 | 7.5 |
 | Coro1c-4 | YES | 1435 | 1332 | 339 | 0.242 | 0.280 | 0.234 | 0.243 | 2.4 | K81uf+G | 0 | 0.9379 | 6.3 |
 | Coro1c-5 | YES | 1380 | 1099 | 140 | 0.309 | 0.321 | 0.210 | 0.160 | 2.2 | TVM+G | 0 | 0.9084 | 4.7 |
 | Guca1b-3 | YES | 711 | 711 | 149 | 0.230 | 0.186 | 0.289 | 0.295 | 1.6 | HKY+G | 0 | 0.7174 | 6.1 |
 | Ociad1-4 | YES | 1576 | 1014 | 200 | 0.328 | 0.393 | 0.145 | 0.134 | 1.9 | TVM+G | 0 | 1.3754 | 4.1 |
 | Plod2-13 | NO | 1317 | 1230 | 236 | 0.293 | 0.325 | 0.229 | 0.153 | 2.0 | GTR+G | 0 | 1.555 | 3.3 |
 | Plod2-14 | YES | 1685 | 1068 | 263 | 0.342 | 0.327 | 0.180 | 0.151 | 1.4 | TVM+G | 0 | 1.4866 | 3.7 |
 | Ssr1-5 | YES | 1180 | 783 | 131 | 0.324 | 0.382 | 0.160 | 0.134 | 2.2 | GTR+G | 0 | 1.4043 | 3.6 |
 | Tbc1d7-6 | YES | 1153 | 1095 | 326 | 0.247 | 0.293 | 0.261 | 0.199 | 1.5 | TIM+G | 0 | 0.7365 | 8.2 |
 | Tinagl1-1 | YES | 1263 | 1260 | 250 | 0.208 | 0.208 | 0.295 | 0.290 | 2.4 | HKY+G | 0 | 0.7637 | 3.2 |
 | Tinagl1-3 | YES | 1115 | 1014 | 193 | 0.179 | 0.238 | 0.281 | 0.301 | 1.9 | K81uf+G | 0 | 0.7201 | 3.7 |
 | Wasf1-3 | YES | 1195 | 1021 | 161 | 0.314 | 0.345 | 0.170 | 0.171 | 1.8 | GTR+G | 0 | 1.6253 | 3.9 |
 | Wasf1-6 | YES | 1276 | 1077 | 207 | 0.308 | 0.354 | 0.191 | 0.147 | 2.2 | TVM+G | 0 | 1.7531 | 4.1 |
 | Wasf1-7 | NO | 1380 | 1147 | 223 | 0.314 | 0.355 | 0.165 | 0.166 | 2.0 | GTR+G | 0 | 0.6571 | 3 |
 | Ttr-1 | YES | 1130 | 895 | 159 | 0.263 | 0.279 | 0.227 | 0.231 | 2.4 | TVM+G | 0 | 1.3403 | 4.6 |
 | Fgb-4 | YES | 847 | 523 | 71 | 0.307 | 0.307 | 0.215 | 0.171 | 2.0 | HKY | 0 | equal | 4.5 |
 | Fgb-7 | YES | 642 | 611 | 102 | 0.292 | 0.327 | 0.186 | 0.195 | 1.4 | GTR | 0 | equal | 5.1 |
 | Com1c |  | 15893 | 12570 | 1735 | 0.279 | 0.301 | 0.219 | 0.201 | 2.0 | TVM+I+G | 0.17 | 0.9090 | 4.4 |
 | Com2c |  | 15893 | 15038 | 2137 | 0.279 | 0.302 | 0.218 | 0.201 | 1.9 | GTR+I+G | 0.18 | 0.9078 | 4.6 |
 | Com3c |  | 15893 | 15688 | 2170 | 0.279 | 0.303 | 0.218 | 0.200 | 1.8 | GTR+I+G | 0.18 | 0.9052 | 4.6 |
Mt genes | ND1 | Â | 957 | Â | 357 | 0.309 | 0.274 | 0.122 | 0.295 | 2.6 | GTR+I+G | 0.53 | 0.7988 | 17.3 |
 | ND2 |  | 1044 |  | 483 | 0.363 | 0.263 | 0.098 | 0.275 | 2.1 | GTR+I+G | 0.35 | 0.859 | 23 |
 | COX1 |  | 1545 |  | 556 | 0.282 | 0.302 | 0.175 | 0.241 | 3.1 | GTR+I+G | 0.58 | 1.1772 | 19.1 |
 | COX2 |  | 684 |  | 252 | 0.323 | 0.276 | 0.142 | 0.260 | 3.3 | K81uf+I+G | 0.56 | 1.0711 | 19.6 |
 | ATP8 |  | 204 |  | 92 | 0.388 | 0.291 | 0.077 | 0.243 | 2.2 | GTR+I+G | 0.42 | 1.3437 | 22.8 |
 | ATP6 |  | 681 |  | 290 | 0.306 | 0.291 | 0.116 | 0.287 | 3.3 | GTR+I+G | 0.46 | 0.7582 | 21.6 |
 | COX3 |  | 784 |  | 303 | 0.273 | 0.286 | 0.154 | 0.286 | 2.6 | TrN+I+G | 0.53 | 0.8079 | 20.2 |
 | ND3 |  | 348 |  | 160 | 0.320 | 0.279 | 0.130 | 0.272 | 2.5 | TrN+I+G | 0.38 | 0.956 | 22.3 |
 | ND4L |  | 297 |  | 127 | 0.287 | 0.324 | 0.124 | 0.265 | 2.9 | TVM+I+G | 0.43 | 0.7530 | 22.5 |
 | ND4 |  | 1378 |  | 609 | 0.323 | 0.278 | 0.115 | 0.284 | 2.8 | GTR+I+G | 0.42 | 0.835 | 22.1 |
 | ND5 |  | 1830 |  | 739 | 0.331 | 0.274 | 0.115 | 0.280 | 2.6 | TIM+I+G | 0.42 | 0.8367 | 19.6 |
 | ND6 |  | 534 |  | 192 | 0.417 | 0.203 | 0.101 | 0.278 | 2.7 | K81uf+I+G | 0.46 | 0.656 | 16.3 |
 | CYTB |  | 1140 |  | 446 | 0.295 | 0.278 | 0.134 | 0.293 | 2.8 | TVM+I+G | 0.5 | 1.1027 | 18.7 |
 | 12SrRNA |  | 988 |  | 236 | 0.371 | 0.229 | 0.178 | 0.223 | 2.8 | GTR+I+G | 0.37 | 0.3532 | 9.2 |
 | 16SrRNA |  | 1626 |  | 403 | 0.369 | 0.243 | 0.174 | 0.213 | 2.1 | GTR+I+G | 0.47 | 0.5765 | 10.5 |
 | tRNA |  | 1558 |  | 301 | 0.353 | 0.281 | 0.157 | 0.209 | 4.0 | GTR+I+G | 0.48 | 0.4371 | 7.3 |
 | D-loop |  | 941 |  | 315 | 0.308 | 0.277 | 0.166 | 0.249 | 1.9 | HKY+I+G | 0.3 | 0.4867 | 11.4 |
 | Combined |  | 16537 |  | 5855 | 0.329 | 0.272 | 0.140 | 0.259 | 2.7 | GTR+I+G | 0.5 | 0.9372 | 16.9 |