Table 1 Tests of parallel and convergent evolution of PGRPs.
From: Evolutionary origin of peptidoglycan recognition proteins in vertebrate innate immune system
Species | n | P | Site positions |
|---|---|---|---|
A. Parallel changes | |||
Pig-S & Cow-S | 3 | 0.003 | 2, 78, 113 |
Frog-S2 & Rat-S | 2 | 0.02* | 34, 77 |
Rainbow trout-L1 & stickleback-L | 3 | 0.006 | 45, 52, 120 |
Rat-Ia-C & Rat-S | 1 | 0.03 | 77 |
Fugu-L & Pig-L | 1 | 0.04* | 89 |
Chicken-L & Salmon-L | 1 | 0.049 | 108 |
Rainbow trout-L1 & Zebrafish-L1 | 3 | 0.03 | 45, 100, 114 |
Stickleback-L & Rat-Ia-C | 1 | 0.048 | 125 |
B. Convergent changes | |||
Human-Ib-N & Rat-Ib-C | 1 | 0.029 | 5 |
Cow-S & Frog-L | 2 | 0.0071 | 12, 125 |
Pig-S & Frog-S1 | 2 | 0.002 | 15, 123 |
Fugu-L & Hagfish-S | 2 | 0.007 | 21, 78 |
Frog-S2 & Rat-S | 1 | 0.02* | 100 |
Mouse-L & Killifish-L | 1 | 0.02 | 38 |
Mouse-L & Rat-Ia-N | 1 | 0.05 | 38 |
Rat-Ia-N & Killifish-L | 1 | 0.035 | 38 |
Carp-L & Hagfish-S | 2 | 0.007 | 41, 140 |
Mouse-Ia-N & Pig-S | 1 | 0.016 | 43 |
Mouse-S & Mouse-Ib-C | 1 | 0.014 | 52 |
Rat-Ib-N & Pig-S | 1 | 0.02 | 54 |
Rainbow trout-L1 & Mouse-Ia-N | 1 | 0.02 | 77 |
Fugu-L & Pig-L | 1 | 0.04* | 78 |
Pig-L & Human-Ia-C | 1 | 0.02 | 96 |
Rat-S & Rainbow trout-L1 | 1 | 0.05 | 100 |
Mouse-L & Zebrafish-L1 | 1 | 0.048 | 101 |
Rat-S & Cow-S | 1 | 0.015 | 101 |
Human-S & Salmon-L | 1 | 0.008 | 108 |
Pig-S & Salmon-L | 1 | 0.008 | 108 |
Human-S & Chicken-L | 2 | 0.007 | 105, 108 |
Frog-S1 & Mouse-Ia-C | 1 | 0.038 | 109 |
Mouse-L & Mouse-Ia-N | 1 | 0.02 | 117 |
Human-Ia-C & Rat-S | 1 | 0.03 | 121 |
Carp-L & Fugu-L | 1 | 0.021 | 123 |
Zebrafish-L2-N & Medaka-L1 | 1 | 0.009 | 145 |