Model | ω (back) | ω (fore) | lnL | χ2 | p | Model | ω (back) | ω(fore) | lnL | χ2 | p |
---|---|---|---|---|---|---|---|---|---|---|---|
AGAP005194 - branch test (foreground ω> background ω) | AGAP005196 - branch test (foreground ω> background ω) | ||||||||||
Test for A. merus | Test for A. melas + A. merus | ||||||||||
H0 | 0.46 | 0.46 | -1779.96 | Â | Â | H0 | 0.34 | 0.34 | -1331.85 | Â | Â |
H1 | 0.45 | infinite | -1780.10 | n.a. | n.a. | H1 | 0.31 | 2.22 | -1329.46 | 4.77 | 0.03 |
H2 | 0.36 | 1.09 | -1776.10 | 7.72 | 0.01 | H2 | 0.27 | 0.66 | -1329.97 | 3.76 | 0.05 |
AGAP005194 - branch test (foreground ω> 1) |  |  | AGAP005196 - branch test (foreground ω> 1) |  |  | ||||||
H0 (ω = 1) | 0.36 | 1.00 | -1776.13 |  |  | H0 (ω = 1) | 0.31 | 1.00 | -1329.79 |  |  |
H2 | 0.36 | 1.09 | -1776.10 | 0.05 | 0.82 | H1 | 0.31 | 2.22 | -1329.46 | 0.66 | 0.42 |
AGAP005195 - branch test (foreground ω> background ω) | AGAP005196 § - branch test (foreground ω> background ω) | ||||||||||
Test for A. merus | Â | Â | Â | Â | Â | Test for A. melas | Â | Â | Â | Â | Â |
H0 | 0.62 | 0.62 | -1859.32 | Â | Â | H0 | 0.38 | 0.38 | -1067.31 | Â | Â |
H1 | 0.59 | 0.97 | -1858.97 | n.a. | n.a. | H1 | 0.35 | infinite | -1065.96 | 2.70 | 1.00 |
H2 | 0.55 | 1.38 | -1858.00 | 2.65 | 0.10 | H2 | 0.33 | 1.59 | -1066.02 | 2.58 | 0.11 |
Test for A. melas | Â | Â | Â | Â | Â | Test for A. melas + A. merus | Â | Â | Â | ||
H0 | 0.62 | 0.62 | -1859.32 | Â | Â | H0 | 0.38 | 0.38 | -1067.31 | Â | Â |
H1 | 0.65 | 0.21 | -1858.65 | 1.34 | 0.25 | H1 | 0.32 | 2.14 | -1065.25 | 4.12 | 0.04 |
H2 | 0.64 | 0.15 | -1858.59 | 1.46 | 0.23 | H2 | 0.29 | 0.69 | -1065.96 | 2.70 | 0.10 |
Test for A. melas + A. merus |  |  |  | AGAP005196 § - branch test (foreground ω> 1) |  | ||||||
H0 | 0.62 | 0.62 | -1859.32 |  |  | H0 (ω = 1) | 0.32 | 1.00 | -1065.54 |  |  |
H1 | 0.61 | 0.72 | -1859.28 | 0.08 | 0.78 | H1 | 0.32 | 2.14 | -1065.25 | 0.59 | 0.44 |
H2 | 0.60 | 0.71 | -1859.24 | 0.15 | 0.69 | Â | Â | Â | Â | Â | Â |
AGAP005195 - branch-site test for A. melas + A. merus | AGAP005196 - branch-site test for A. melas | ||||||||||
Model A1 (ω = 1) | - | - | -1809.83 |  |  | Model A1 (ω = 1) | - | - | -1053.14 |  |  |
Model A (ω variable) | - | - | -1803.44 | 12.78 | 3.51 × 10 -4 * | Model A (ω variable) | - | - | -1057.53 | 8.77 | 0.00* |
Sites with d N /d S > 1 | 71 | Â | Â | Â | Â | Sites with d N /d S > 1 | - | Â | Â | Â | Â |