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Table 2 Summary of outlier SNP loci* or candidates for diversifying† or balancing‡ selection in sockeye salmon

From: Single nucleotide polymorphisms unravel hierarchical divergence and signatures of selection among Alaskan sockeye salmon (Oncorhynchus nerka) populations

SNP locus

Description

SNP location

Reference

One_GPH-414 †

Glycoprotein hormone alpha subunit

Intronic

Elfstrom et al. [40]

One_HpaI-99 †

HpaI repetitive elements

Intronic

Elfstrom et al. [40]

One_MHC2-190 †

Major Histocompatibility Complex class II

Exonic

Elfstrom et al. [40] Miller & Withler [54]

One_MHC2-251 †

Major Histocompatibility Complex class II

Intronic

Elfstrom et al. [40] Miller & Withler [54]

One_STC-410 †

Ovarian stanniocalcin

Intronic

Elfstrom et al. [40]

One_STR07 †

Unknown

-

Elfstrom et al. [40]

One_U404-229 †

Unknown

-

Habicht et al. [41]

One_U502-167 ‡

Unknown

-

Habicht et al. [41]

  1. *Using BAYESCAN [51] and Arlequin 3.5 [52].