Detecting the symplesiomorphy trap: a multigene phylogenetic analysis of terebelliform annelids

Zhong, Min; Hansen, Benjamin; Nesnidal, Maximilian; Golombek, Anja; Halanych, Kenneth M; Struck, Torsten H

doi:10.1186/1471-2148-11-369

BMC Ecology and Evolution

Table 1 Taxa used in phylogenetic analyses with 17 taxa.

From: Detecting the symplesiomorphy trap: a multigene phylogenetic analysis of terebelliform annelids

Taxon	Species	mtDNA¹	18S rDNA	28S rDNA	EF1α²	Locality³
Terebelliformia
Ampharetidae	Eclysippe vanelli	EU239687	JN936467	JN936489		63°30.84'N/10°25.01'E Storgrunnen (Norway)
	Auchenoplax crinita	FJ976041	DQ790077	DQ790026	DQ813352	39°53.88'N/69°39.64'W Southern New England (USA)
Pectinariidae	Pectinaria gouldi	FJ976040	DQ790091	DQ790054		41°37.91'N/70°53.34'W Egypt Lane, Fairhaven, MA (USA)
	Pectinaria koreni				DQ813388
Terebellidae	Pista cristata	EU239688	AY611461	DQ790057	DQ813391
Trichobranchidae	Terebellides stroemi	EU236701	DQ790094	DQ790066
	Terebellides sp.				DQ813404
Alvinellidae	Paralvinella sulfincola	FJ976042	JN936461			47°57.001'N/129°05.851'W Juan de Fuca (Canada)
	Paralvinella palmiformis			JN936479		47°56.947'N/129°05.878'W Juan de Fuca (Canada)
	Paralvinella hessleri				DQ813385
Outgroups
Siboglinidae	Galathealinum brachiosum	AF178679	AF168738
	Siboglinum fiordicum			DQ790061	DQ813398
	Riftia pachyptila	AY741662	AF168739	Z21534	DQ813394
Clitellata	Helobdella robusta	AF178680
	Helobdella triserialis		AY962435
	Hirudo medicinalis			AY364866	U90063
	Lumbricus terrestris	NC_001673	AJ272183
	Lumbricus sp.			DQ790041	DQ813373
Nereididae	Platynereis dumerilii	NC_000931	EF117897
	Nereis succinea			AY210464
	Nereis virens				U90064
Echiura	Urechis caupo	AY619711	AF342805		DQ813410
	Arhynchite pugettensis			AY210455
Nephtyidae	Nephtys longosetosa		DQ790082	DQ790042
	Nephtys sp.	EU293739			DQ813376
Sipuncula	Phascolopsis gouldi	AF374337	AF123306	AF342795	AF063421
Orbiniidae	Orbinia latreillii	AY961084	AY532355
	Orbinia swani		DQ790087	DQ790048
	Orbinia michaelseni				DQ813381
	Scoloplos cf. armiger	DQ517436	AY340443	AY366515
Maldanidae	Clymenella torquata	AY741661		DQ790030	DQ813356
	Clymenura clypeata		AF448152

Accession numbers of determined sequences are in bold.
¹mtDNA = mitochondrial genome
²EF1α = elongation factor 1α
³for locality information on available data see original source

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ISSN: 2730-7182

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