Evolutionary relationships of the old world fruit bats (Chiroptera, Pteropodidae): Another star phylogeny?

Table 3 Partition schemes used in ML analyses of combined dataset 1

scheme	#^a	partitions^b	ln L	AIC/AICc	BIC	parameters	topology^c
1	1	no partition	-94660.30	189554.6	190374.7	117	A
2	4	codon_1, codon_2, codon_3, 12S16S	-90704.00	181696	182705.4	144	A
3	5	nuclear_12, nuclear_3, Cytb_12, Cytb_3, 12S16S	-86566.50	173439	174511.4	153	B
4	6	RAG1, RAG2, vWF, BRCA1, Cytb, 12S16S	-90465.01	181254	182389.6	162	C
5	7	nuclear_1, nuclear_2, nuclear_3, Cytb_1, Cytb_2, Cytb_3, 12S16S	-86362.20	173066.3	174264.9	171	D
6	11	RAG1_12, RAG1_3, RAG2_12, RAG2_3, vWF_12, vWF_3, BRCA1_12, BRCA1_3, Cytb_12, Cytb_3, 12S16S	-85935.75	172296.3	173736.5	207	B
7	16	each codon position for each coding gene, 12S16S	-85683.00	171887.5	173637.8	252	E

^a Number of partitions. ^b Numbers after underscore represent codon position. ^c Topologies are illustrated in the Additional file 5.

ISSN: 2730-7182