Table 1 Numbers of endogenous circular ssDNA virus-like sequences in eukaryotic genomes
From: Widespread Horizontal Gene Transfer from Circular Single-stranded DNA Viruses to Eukaryotic Genomes
| Organism group | Organism | No. of virus-related genes | |
|---|---|---|---|
| Rep | Capsid | ||
| Plants | |||
| land plants | Populus trichocarpa (black cottonwood) | 1 | |
| Nicotiana tabacum (common tobacco) | 1 | ||
| green algae | Micromonas pusilla (green algae) CCMP1545 | 1 | |
| Fungi | |||
| ascomycetes | Aspergillus nidulans FGSC A4 | 1 | |
| Aspergillus fumigatus A1163 | 1 | ||
| Aspergillus niger CBS 513.88 | 1 | ||
| Trichoderma atroviride IMI 206040 | 1 | ||
| Magnaporthe oryzae 70-15 (rice blast fungus) | 1 | ||
| Nectria haematococca mpVI 77-13-4 | 4 | ||
| Tuber melanosporum Mel28 (Perigord truffle) | 42 | ||
| basidiomycetes | Laccaria bicolor S238N-H82 (Bicoloured deceiver) | 5 | |
| Protists | |||
| protozoans | Entamoeba invadens IP1 | 10 | |
| Entamoeba terrapinae | 3 | ||
| Entamoeba histolytica HM-1:IMSS | 14 | ||
| Entamoeba dispar SAW760 | 7 | ||
| Blastocystis hominis Singapore isolate B (sub-type 7) | 7 | ||
| Giardia intestinalis ATCC 50581 strain GS/M H7 | 13 | ||
| Giardia intestinalis isolate BRIS/92/HEPU/1541 | 2 | ||
| diatoms | Phaeodactylum tricornutum (diatom) | 1 | |
| Animals | |||
| mammals | Canis lupus familiaris (dog) * | 4 | |
| Monodelphis domestica (gray short-tailed opossum) * | 1 | ||
| Felis catus(domestic cat) * | 6 | ||
| Ailuropoda melanoleuca (giant panda) * | 12 | ||
| Choloepus hoffmanni (Hoffmann's two-fingered sloth) * | 2† | ||
| gastropods | Aplysia californica (California sea hare) | 1 | |
| amphibians | Xenopus (Silurana) tropicalis(western clawed frog) * | 2 | |
| lancelets | Branchiostoma floridae (Florida lancelet) strain S238N-H82 | 7 | |
| roundworms | Brugia malayi (agent of lymphatic filariasis) | 1 | |
| Loa loa (African eyeworm) | 10 | ||
| Wuchereria bancrofti (agent of lymphatic filariasis) | 3 | ||
| Onchocerca volvulus (agent of onchocerciasis) | 5 | ||
| crustaceans | Lepeophtheirus salmonis (salmon louse) strain Pacific | 59 | |
| mites & ticks | Varroa destructor (honeybee mite)strain Korean | 56 | |
| placozoans | Trichoplax adhaerens (placozoan) strain Grell-BS-1999 | 2 | |
| hydrozoans | Hydra magnipapillata (hydrozoan) strain 105 | 18 | |
| Total | 35 | 302 | 3 |