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Table 4 Sequence variations of Adh1-1 and LEAFY subparalogs in Pyrus (excluding the Malus accessions)

From: Molecular evolution of Adh and LEAFY and the phylogenetic utility of their introns in Pyrus (Rosaceae)

 

Reduced Adh1

The second intron of LEAFY

 

Adh1-1a

Adh1-1b

Adh1-1c

LFY1int2

LFY2int2

N a

37

30

17

53

43

NSD b

0.012

0.013

0.011

0.019 (0.016)d

0.029 (0.028)e

PI c

25/617

21/633

11/645

61/653 (42/653)d

46/562 (40/553)e

  1. a The number (N) of sequences used for analyses.
  2. b Mean sequence divergence of nucleotide sequence (NSD) calculated by the K-2P method.
  3. c The number of parsimony-informative (PI) sites after alignment.
  4. d PI sites and NSD in brackets were calculated after excluding LFY1int2-c.
  5. e PI sites and NSD in brackets were calculated after excluding LFY2int2-Ins8 and LFY2int2-Del2.
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BMC Ecology and Evolution

ISSN: 2730-7182

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