Skip to main content

Table 1 PCR annealing temperatures, sequence length, and primer sequences

From: Asymmetric reproductive isolation between terminal forms of the salamander ring species Ensatina eschscholtzii revealed by fine-scale genetic analysis of a hybrid zone

Locus

Annealing

temp.

Length/

# variable sites (bp)

PCR primer

Primer sequence (5'-3')

ND4

48°C

RFLP

ND4

CACCTATGACTACCAAAAGCTCATGTAGAAGC

   

LEU

ACCACGTTTAGGTTCATTTTCATTAC

CXCR4

55°C

116/4

CXCR4F2

TGGTCTGTGGATGCTGTCAT

   

CXCR4R

TGCAGTAGCAGATCAAGATGA

SLC8A3

58°C

342/6

SLC8A3F

CATTCGGGTCTGGAATGAAA

   

SLC8A3R

ACACCACCATCCCCTCTGTA

RAG1

56°C

359/7

Amp F1

ACAGGATATGATGARAAGCTTGT

   

RAG1R

TTRGATGTGTAGAGCCAGTGGTGYTT