Skip to main content

Table 1 Population statistics, diversity estimates and neutrality tests based on ITS region of calochroid taxa studied

From: Tracking the evolutionary history of Cortinarius species in section Calochroi, with transoceanic disjunct distributions

  Population statistics Tests of neutrality
Species/
population
n s h hd k π
(SD)
θw Tajima's
D
Fu and
Li's D*
Statistic
Fu and
Li's F*
Statistic
Fu's Fs
Statistic
C. arcuatorum
Old World 11 1 2 0.182 0.181 3.3 × 10-4
(2.6 × 10-4)
6.1 × 10-4 -1.128
(NS)
-1.289
(NS)
-1.399
(NS)
-0.410
(NS)
New World 15 36 4 0.685 12.229 0.021 0.019 1.635
(NS)
1.502** 1.502
(NS)
9.684
(NS)
Mountain USA 2 0 1 0.000 0.000 0.000 0.000 ND ND ND ND
Pacific USA 10 20 2 0.356 7.111 0.013 (5.6 × 10-3) 0.013 0.027
(NS)
1.567** 1.326
(NS)
9.432
(NS)
Costa Rica 3 0 1 0.000 0.000 0.000 0.000 ND ND ND ND
All
(l = 559)
26 37 5 0.698 13.741 0.024
(1.9 × 10-3)
0.017 1.569
(NS)
1.568** 1.843** 13.357
(NS)
C. aureofulvus
Old World 7 1 2 0.571 0.571 0.001
(2.1 × 10-4)
7.3 × 10-4 1.341
(NS)
0.953
(NS)
1.101
(NS)
0.856
(NS)
New World 11 2 3 0.618 0.690 1.23 × 10-3
(2.9 × 10-4)
1.22 × 10-3 0.036
(NS)
-0.033
(NS)
-0.269
(NS)
-0.113
(NS)
Mountain USA 2 0 1 0.000 0.000 0.000 0.000 ND ND ND ND
Pacific USA 9 2 3 0.667 0.777 0.001
(3.2 × 10-4)
0.001 0.195
(NS)
-0.221
(NS)
-0.135
(NS)
-0.108
(NS)
All
(l = 560)
18 4 5 0.804 1.346 0.002
(3.0 × 10-4)
0.002 0.473
(NS)
0.211
(NS)
0.324
(NS)
-0.505
(NS)
C. elegantior
Old World 16 3 4 0.442 0.4833 9 × 10-4
(3.6 × 10-4)
0.002 -1.316
(NS)
-1.122
(NS)
-1.351
(NS)
-1.867
(NS)
New World 67 7 7 0.662 1.003 0.002
(2.7 × 10-4)
0.003 -0.791
(NS)
-0.420
(NS)
-0.638
(NS)
-1.614
(NS)
Mountain USA 62 4 5 0.608 0.739 0.001
(1.8 × 10-4)
0.002 -0.288
(NS)
-0.153
(NS)
-0.228
(NS)
-0.753
(NS)
Pacific 5 1 2 0.400 0.400 7.8 × 10-4
(4.6 × 10-4)
9.3 × 10-4 -0.816
(NS)
-0.816
(NS)
-0.771
(NS)
0.090
(NS)
All
(l = 516)
83 13 11 0.760 2.139 4.2 × 10-3
(4.2 × 10-4)
0.005 -0.495
(NS)
-0.782
(NS)
-0.808
(NS)
-1.468
(NS)
C. napus
Old World 8 0 1 0.000 0.000 0.000 0.000 ND ND ND ND
New World 19 2 3 0.368 0.385 6.8 × 10-4
(2.5 × 10-4)
1.0 × 10-3 -0.777 -0.573 -0.720 -0.725
(NS)
Mountain USA 16 1 2 0.325 0.325 5.8 × 10-4
(2.2 × 10-4)
5.3 × 10-4 0.155
(NS)
0.688
(NS)
0.627
(NS)
0.551
(NS)
Pacific USA 3 1 2 0.667 0.666 1.1 × 10-3
(5.6 × 10-4)
0.002 ND ND ND 0.201
(NS)
All
(l = 564)
27 2 3 0.271 0.279 5.0 × 10-4
(2.0 × 10-4)
9.2 × 10-4 -0.977
(NS)
-0.702
(NS)
-0.898
(NS)
-1.088
(NS)
  1. l, nucleotide sequence length; n, sample size; s, number of segregating sites; h, haplotypes; hd, haplotype diversity; k, average number of nucleotide pair wise differences; π, number of nucleotide differences per site (SD = standard deviation of π); θw, Watterson's estimate of θ per site; ND, not determined because no polymorphism was found; NS, non-significant; **, P < 0.02.