Table 2 Amino acid similarities and identities of some protein sequences deduced from entries of metagenomic study with selected geminivirus CPs
From: On the alleged origin of geminiviruses from extrachromosomal DNAs of phytoplasmas
| Â | Â | Â | Â | Â | Alignment |
|---|---|---|---|---|---|
Query sequence | Most similar geminivirus CP | Identity | Similarity | length | |
JCVIPEP1105104354663 | Q5UAE8 | Indian cassava mosaic virus | 23.4 | 39.7 | 250 |
JCVIPEP1105107973141 | A7UGA6 | Sweet potato leaf curl virus | 22.4 | 36.6 | 183 |
JCVIPEP1105096364985 | A7UGA6 | Sweet potato leaf curl virus | 22.8 | 37.6 | 250 |
JCVIPEP1105092295201 | C7TPA7 | Mung bean yellow mosaic India virus | 27.3 | 44.6 | 139 |
JCVIPEP1105092294601 | Q645H3 | Corchorus yellow vein virus | 18.5 | 32.4 | 222 |
JCVIPEP1105092292339 | Q19LG2 | Tomato golden mottle virus | 27.6 | 42.9 | 217 |
SNTV (PDBID:2BUK) | Q4LAS1 | Wheat dwarf virus | 18.7 | 32.2 | 267 |