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Table 2 Base substitutions (bs) in CB4856 and CB4858 relative to the N2 reference genome*.

From: Shifting patterns of natural variation in the nuclear genome of caenorhabditis elegans

 

N2-> CB4856

Base Sub

N2->CB4856

Base Sub

N2>CB4 858

Base Sub

N2->CB4858

Base Sub

Transitions

        
 

G->A

621

(0.11)

A->G

745

(0.14)

G->A

5266

(0.14)

A->G

5375

(0.14)

 

C->T

639

(0.12)

T->C

722

(0.13)

C->T

5163

(0.14)

T->C

5341

(0.14)

Transversions

        
 

C->A

278

(0.05)

A->C

374

(0.07)

C->A

1871

(0.05)

A->C

1945

(0.05)

 

G->T

276

(0.05)

T->G

345

(0.06)

G->T

1906

(0.05)

T->G

1893

(0.05)

 

T->A

480

(0.09)

A->T

484

(0.09)

T->A

3185

(0.09)

A->T

3240

(0.09)

 

G->C

240

(0.04)

C->G

232

(0.04)

G->C

964

(0.03)

C->G

989

(0.03)

  1. *Number (Proportions out of all base substitutions in each strain: 5436 base substitutions in CB4856 and 37138 base substitutions in CB4858)