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Table 1 Overview of genome wide differences between N2 and CB4856 or CB4858

From: Shifting patterns of natural variation in the nuclear genome of caenorhabditis elegans

Polymorphism CB4856 CB4856 × 10-4
SNPs per base 		CB4858 CB4858 × 10-4
SNPs per base
Base     
Substitutions     
   single 4926 10.6 36568 5.11
   sequential 476 1.02 564 0.08
   Sub total 5402 11.6 37132 5.18
Insertions 2024 4.34 2668 0.37
   single     
   sequential 1197 2.57 0 0.00
   Ins total 3221 6.91 2668 0.37
Deletions 2618 5.62 2393 0.33
   single     
   sequential 2009 4.31 0 0.00
   Del total 4627 9.93 2393 0.33
Inversions     
   2 bp 98 0.21 53 0.01
   3+bp 12 0.03 23 0.00
   Total Inv 110 0.24 76 0.01
Total 13360 28.7 42269 5.90
  1. The total number of bases assayed in CB4856 was 4658922 (4.6465% of the C. elegans reference genome). The numbers of SNPs observed in CB4858 was based on the assay of 77% of the C. elegans reference genome (Hiller et al., 2008).
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BMC Ecology and Evolution

ISSN: 2730-7182

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