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Table 3 Expression changes in genes with swapped mutants and wild type.

From: Evidence of association between Nucleosome Occupancy and the Evolution of Transcription Factor Binding Sites in Yeast

   SWAP BY(WT)  
Systemic name TFBS ΔCt Target/Act1 STDEV ΔCt Target/Act1 STDEV Nucleosome
occupancy
YBR248C ABF1 3.091 0.167 2.443 0.070 NDR*
YDR519W HAC1 3.648 0.012 2.846 0.050 NDR
YGL253W RGT1 -0.259 0.179 -0.192 0.026 NDR
YLR214W RCS1 3.245 0.270 2.747 0.079 NDR*
YLR450W ROX1 1.757 0.236 1.688 0.031 NDR
YPL111W ABF1 0.245 0.013 0.075 0.056 NDR*
YAL054C CAT8 6.233 0.225 6.145 0.014 NR
YDR072C PDR3 5.574 0.024 5.363 0.001 NR
YGL255W ZAP1 7.008 0.048 5.435 0.004 NR*
YKL175W ZAP1 2.685 0.184 2.788 0.013 NR
YML075C ROX1 1.871 0.087 1.732 0.099 NR
YNL117W CAT8 -1.444 0.056 -1.331 0.126 NR
  1. Twelve genes that experienced TFBS gain or loss events at both NDRs and NRs were selected for site-directed mutagenesis and expression analysis. T-test was based on ΔCt of swapped mutants and BY4741(wild type).
  2. * Significantly different from ΔCtBY(p-value< 0.05) by t-test
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