Skip to main content

Table 2 Codon usage and tRNA anticodons in the pterobranch R. compacta.

From: The enigmatic mitochondrial genome of Rhabdopleura compacta(Pterobranchia) reveals insights into selection of an efficient tRNA system and supports monophyly of Ambulacraria

UUU

554

Phe

UCU

233

Ser

UAU

159

Tyr

UGU

99

Cys

UUC

35

Phe *

UCC

8

Ser

UAC

28

Tyr *

UGC

10

Cys *

UUA

205

Leu *

UCA

32

Ser *

UAA

2

term

UGA

48

Trp *

UUG

210

Leu

UCG

21

Ser

UAG

9

term

UGG

89

Trp

CUU

102

Leu

CCU

93

Pro

CAU

70

His

CGU

46

Arg

CUC

5

Leu?

CCC

5

Pro

CAC

8

His *

CGC

4

Arg

CUA

19

Leu *

CCA

10

Pro *

CAA

16

Gln *

CGA

15

Arg *

CUG

14

Leu

CCG

11

Pro

CAG

31

Gln

CGG

19

Arg

AUU

175

Ile

ACU

76

Thr

AAU

79

Asn

AGU

87

Ser

AUC

9

Ile *

ACC

3

Thr

AAC

8

Asn *

AGC

10

Ser *

AUA

52

Ile

ACA

5

Thr *

AAA

10

Lys

AGA

40

Ser

AUG

96

Met *

ACG

5

Thr

AAG

59

Lys *

AGG

20

Lys

GUU

289

Val

GCU

99

Ala

GAU

60

Asp

GGU

158

Gly

GUC

17

Val

GCC

4

Ala

GAC

9

Asp *

GGC

8

Gly

GUA

39

Val *

GCA

12

Ala *

GAA

17

Asp *

GGA

63

Gly *

GUG

64

Val

GCG

11

Ala

GAG

59

Asp

GGG

182

Gly

  1. The total number of codons is shown. The assignment of each codon was detected within a metazoan alignment using GenDecoder server v1.6 [41]. The reverse complements of the anticodons are marked by asterisks, deviations from the versatility rule [15, 16, 18] are underlined. One codon (question mark) could not be determined with certainty.