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Table 2 Polymorphisms of An. cruzii sibling species from Florianópolis and Itaparica

From: Estimation of divergence time between two sibling species of the Anopheles (Kerteszia) cruziicomplex using a multilocus approach

Locus

Population

RM

Length (bp)

n

S

θ

π

D T

D FL

F FL

timeless

Florianópolis

14

413

(258)

24

(15)

59

(16)

0.04314

(0.02141)

0.03081

(0.02080)

-0.98320

(-0.02183)

-0.54978

(0.71094)

-0.80513

(0.58572)

 

Itaparica

  

28

(28)

24

(14)

0.01661

(0.01602)

0.01035

(0.00994)

-1.31797

(-1.25698)

-0.83982

(-0.77081)

-1.16519

(-1.07989)

Clock

Florianópolis

03

159

(154)

24

(21)

10

(09)

0.01750

(0.01688)

0.01774

(0.01703)

0.11242

(0.09477)

-0.60737

(-0.19574)

-0.45842

(-0.12971)

 

Itaparica

  

24

(21)

08

(06)

0.01592

(0.01282)

0.02253

(0.01789)

1.41474

(1.30746)

1.33358

(1.24418)

1.57772

(1.45949)

cycle

Florianópolis

05

218

(96)

24

(21)

21

(12)

0.02787

(0.03929)

0.02802

(0.02946)

-0.34121

(-0.77817)

0.56744

(0.44350)

0.50899

(0.25060)

 

Itaparica

  

24

(24)

03

(03)

0.00370

(0.00845)

0.00304

(0.00691)

-0.43933

(-0.43933)

0.97946

(0.97946)

0.67147

(0.67147)

Rp49

Florianópolis

01

269

(223)

24

(21)

10

(09)

0.01134

(0.01299)

0.00849

(0.00876)

-0.82070

(-1.09222)

-0.43327

(-1.00506)

-0.63920

(-1.19531)

 

Itaparica

  

24

(24)

09

(09)

0.00915

(0.01109)

0.00678

(0.00820)

-0.82379

(-0.82379)

-1.35698

(-1.35698)

-1.39541

(-1.39541)

RpS2

Florianópolis

01

270

(266)

24

(23)

17

(17)

0.01879

(0.01931)

0.01723

(0.01719)

-0.22879

(-0.33019)

0.94975

(0.95577)

0.69085

(0.66273)

 

Itaparica

  

24

(24)

08

(07)

0.00807

(0.00716)

0.00863

(0.00679)

0.25353

(-0.13512)

0.73702

(0.62918)

0.69164

(0.47169)

RpS29

Florianópolis

02

274

(239)

24

(21)

13

(07)

0.01375

(0.00836)

0.00907

(0.00774)

-1.14756

(-0.21099)

-2.19895

(-0.60726)

-2.19619

(-0.57191)

 

Itaparica

  

24

(23)

20

(13)

0.02101

(0.01499)

0.01002

(0.00877)

-1.87423

(-1.42007)

-2.78643

(-1.74321)

-2.93189

(-1.91842)

  1. RM, the minimum number of recombination events; n, number of DNA sequences of each sibling species; S, number of polymorphic (segregating) sites; θ, nucleotide diversity based on the total number of mutation (Eta); π, nucleotide diversity based on the average number of pair-wise differences; D T , Tajima's D [9]; D FL , Fu & Li's D [10] and F FL , Fu & Li's F [10], based on Eta (total number of mutations). No significant deviations from neutrality were observed after Bonferroni correction. Numbers in parentheses are related to the non-recombining block (NR) for each locus.