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Table 4 Summary of all the functional categories of the proteins shared by Acinetobacter plasmids and chromosomes.

From: Exploring the evolutionary dynamics of plasmids: the Acinetobacter pan-plasmidome

Functional category A. baumannii ATCC17978 A. baumannii AYE A. baumannii SDF A. baumannii AB0057 A. baumannii AB307 A. baumannii ACICU Acinetobacter. sp. ADP1 Total
Transposases 4 0 279 3 0 2 0 288
No Pfam hits 5 8 7 13 8 14 4 61
Uncharcterized/others 7 5 0 3 0 7 4 26
Cold-shock DNA-binding domain 2 4 1 3 4 2 3 19
Integrase 1 3 0 3 0 9 0 16
Zinc-binding dehydrogenase 1 2 1 2 2 2 2 12
Nucleoside recognition 3 1 1 1 1 1 1 9
ABC transporter 0 1 1 2 1 1 1 7
H-NS histone family 1 1 1 1 1 1 1 7
Penicillin binding protein transpeptidase domain 1 1 1 2 1 1 0 7
Mer-related protein 0 4 0 2 0 0 0 6
Haloacid dehalogenase-like hydrolase 1 1 1 1 1 1 0 6
Cation efflux family 1 1 1 1 1 1 0 6
regulatory proteins tetR-like 0 1 1 1 1 1 1 6
Catalase 1 1 0 1 1 1 0 5
Secretory lipase 1 1 0 1 1 1 0 5
AraC-like ligand binding domain 1 1 0 1 1 1 0 5
Resolvase 1 0 1 0 0 0 0 2
Proteins shared with plasmids at 50% identity 31 36 296 41 24 46 17 493