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Table 3 Predicted founder alleles of major WSP complexes and corresponding profiles, estimated using TCS.

From: Accelerated microevolution in an outer membrane protein (OMP) of the intracellular bacteria Wolbachia

   

Founder WSP profile

Complex

No. of prot/alleles

Ancestral allele1

HVR1

HVR2

HVR3

HVR4

C1

23/33

wsp-23

1

12

21

19

C2

23/31

wsp-11

9

9

12

9

C3

15/15

wsp-310

51

143

15

25

C4

14/20

wsp-160

2

17

3

23

C5

14/21

wsp-61

18

16

23

16

C6

13/16

wsp-10

10

8

10

8

C7

10/10

wsp-18

13

15

17

14

C8

6/7

wsp-238*

104

114

111

99

C9

6/10

wsp-91

30

28

31

30

C10

6/9

wsp-156

71

34

15

25

C11

5/6

wsp-24

17

19

22

18

C12

5/5

wsp-28

21

21

25

21

C13

4/4

wsp-308

2

142

131

23

C14

4/6

wsp-291

24

24

27

26

C15

4/5

wsp-33

1

23

15

25

C16

4/4

wsp-427

8

1

182

138

C17

4/4

wsp-277*

11

13

133

14

C18

3/5

wsp-448

112

131

43

114

C19

3/5

wsp-64

35

35

38

44

C20

3/4

wsp-266

111

130

3

23

C21

3/4

wsp-398

71

174

176

25

C22

3/3

wsp-195

5

5

94

5

C23

3/3

wsp-89

54

28

62

60

C24

3/4

wsp-63

19

17

24

33

C25

3/5

wsp-54

38

39

46

43

C26

3/5

wsp-505

42

43

198

25

C27

3/3

wsp-332

136

8

10

132

C28

3/9

wsp-138

74

20

24

80

C29

3/3

wsp-508*

181

149

147

120

  1. 1 P of parsimony of mutational steps >95%
  2. * The corresponding profile did not match eBURST prediction