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Table 2 List of the SAT 1 virus isolates included in this study

From: Evolutionary analysis of foot-and-mouth disease virus serotype SAT 1 isolates from east africa suggests two independent introductions from southern africa

Isolate Codea

District/Country

Geographical groupb

Accession No.

BEC/1/48

Bechuanaland (Botswana)

SA

AY593838

SWA/1/49

South West Africa (Namibia)

SA

AY593840

SA/13/61

South Africa

SA

AY593842

SWA/40/61

South West Africa (Namibia)

SA

AY593843

RHO/5/66

Rhodesia (Zimbabwe)

SA

AY593846

BOT/1/68

Botswana

SA

AY593845

UGA/21/70

Uganda

UG

WRLc

T155/71

Tanzania

KT

HQ267519e

SUD/8/74

Sudan

SU

AY441998

TAN/13/74

Tanzania

KT

AY442001

UGA/13/74

Uganda

UG

AY442010

NIG/11/75

Nigeria

WA

AF431711

NIG/14/75

Nigeria

WA

AF431709

NIG/17/75

Nigeria

WA

AF431712

NIG/24/75

Nigeria

WA

AF431714

NIG/1/76

Nigeria

WA

AF431721

NIG/5/76

Nigeria

WA

AF431723

NIG/14/76

Nigeria

WA

AF431725

NIG/20/76

Nigeria

WA

AF431727

NGR/2/76

Niger

WA

AF431718

NGR/5/76

Niger

WA

AF431720

SUD/3/76

Sudan

SU

AY441966

SUD/4/76

Sudan

SU

AY441997

TAN/2/77

Tanzania

KT

AY442008

NIG/2/79

Nigeria

WA

AF431728

K66/80

Narok, Kenya

KT

HQ267520e

NIG/3/80

Nigeria

WA

AF431729

TAN/3/80

Tanzania

KT

AY442006

K110/81

Kiambu, Kenya

KT

HQ267521e

NIG/5/81

Nigeria

WA

AF431730

NIG/10/81

Nigeria

WA

AF431731

KEN/9/91

Kenya

KT

AY441995

KEN/11/91

Kenya

KT

AY441994

KNP/196/91d

South Africa

SA

AF283429

TAN/5/96

Tanzania

KT

AY442007

TAN/19/96

Tanzania

KT

AY442013

UGA/1/97d

Uganda

UG

AF283439

KEN/4/98

Kenya

KT

AY441993

K58/99

Thika, Kenya

KT

HQ267522e

K96/99

Kajiado, Kenya

KT

HQ267523e

K114/99

Nairobi, Kenya

KT

HQ267524e

TAN/37/99

Tanzania

KT

AY442005

TAN/51/99

Tanzania

KT

AY442004

TAN/60/99

Tanzania

KT

AY442002

UGA/3/99

Uganda

UG

AY442009

UGA/7/99

Uganda

UG

AY442011

ZIM/23/03

Zimbabwe

SA

WRLc

K57/05

Thika, Kenya

KT

HQ267525e

K67/05

Trans Nzoia, Kenya

KT

HQ267526e

K10/06

Thika, Kenya

KT

HQ267527e

K21/06

Nyeri, Kenya

KT

HQ267528e

K28/06

Keiyo, Kenya

KT

HQ267529e

ETH/3/07

Ethiopia

ET

EJ798154

  1. a The letters indicate the country of origin of the isolate while the last numerical field refers to the year of isolation. b Geographical group assignment according to the six defined regions of sub-Saharan Africa: SA (southern Africa), UG (Uganda), KT (Kenya/Tanzania), SU (Sudan), ET (Ethiopia) WA (western Africa). c WRL = From World reference laboratory sequence data website http://www.wrlfmd.org/fmd_genotyping/prototypes.htm. d African buffalo origin. eSequence generated in this study.