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Table 4 Nucleotide substitutions between known cDNA and corresponding genomic sequences

From: Evolution of trappin genes in mammals

  Armadillo
(2 × coverage)
Rabbit
(2 × coverage)
Cat
(1.87 × coverage)
Elephant
(2 × coverage)
Cow
(7 × coverage)
Human
(GRCh37)
SDHA 1/899 14/543 1/976 5/1222 ND 3/1650
MDH2 2/713 2/306 7/878 1/626 0/835 0/912
ATP5B 0/876 2/1237 4/1072 0/926 0/950 0/1335
GAPDH 6/413 ND 2/683 0/542 1/674 0/691
SDHB 0/476 1/468 0/586 ND 1/551 0/591
CS 0/646 0/672 2/564 2/677 2/653 0/673
IDH1 4/477 0/666 0/740 1/1077 7/1064 1/1114
total 13/4500 19/3892 16/5499 9/5070 11/4727 4/6966
substitution rate (%) 0.29 0.49 0.29 0.10 0.23 0.06
identity (%) 99.7 99.5 99.7 99.9 99.8 99.9
  1. Numbers show the nucleotide substitutions per the length of the sequences used for the analysis. The scaffold, contig, or accession numbers of the sequences are shown in Supplementary Table S1 (additional file 1). ND, no data.