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Table 1 Mitochondrial DNA (mtDNA) cytochrome b (cyt b) sequence divergence, nucleotide and haplotype diversity values between and within lineages/haplogroups as identified by MINSPNET, TCS and phylogenetic analyses, within Micaelamys namaquensis from southern Africa.

From: Bioregion heterogeneity correlates with extensive mitochondrial DNA diversity in the Namaqua rock mouse, Micaelamys namaquensis(Rodentia: Muridae) from southern Africa - evidence for a species complex

GROUPS/LINEAGES

UNCORRECTED P-DISTANCE WITHIN LINEAGE DIVERGENCE

UNCORRECTED P-DISTANCE BETWEEN LINEAGE DIVERGENCE

HAPLOTYPE DIVERSITY

PERCENTAGE NUCLEOTIDE DIVERSITY

Lineage A1

-

0.84 - 3.69%

-

-

Lineage A2

0.16 - 2.81%

1.15 - 6.15%

0.97

1.44

Lineage A3

0.17 - 1.21%

0.84 - 5.18%

1.00

0.62

Lineage A4

0.18 - 1.22%

0.88 - 5.03%

0.79

0.46

Lineage A5

0.35 - 1.58%

1.34 - 5.85%

0.83

0.89

Lineage A1-A5

0.16 - 4.46%

1.62 - 6.15%

0.98

2.11

Lineage B1

-

1.18 - 4.26%

-

-

Lineage B2

0.16 - 0.97%

1.18 - 5.63%

0.80

0.56

Lineage B3

0.16 - 3.31%

2.48 - 7.74%

0.90

0.73

Lineage B1-B3

0.16 - 4.63%

1.62 - 7.74%

0.94

1.68

Lineage C

0.16 - 2.06%

2.35 - 6.35%

0.55

0.57

Lineage D

0.16 - 1.81%

2.47 - 7.74%

0.81

0.37

Lineage E

0.16 - 2.96%

2.19 - 6.63%

0.86

0.99

Lineage F

0.65%

1.99 - 5.29%

0.67

0.45

Lineage G

0.16 - 1.17%

2.04 - 6.61%

0.69

0.35

Lineage H

0.16 - 2.10%

3.01 - 6.47%

0.93

0.63

  1. Lineage letter codes as defined in this table are used in all other Figures, Tables and Additional files.