Ancient origin of a Western Mediterranean radiation of subterranean beetles

Ribera, Ignacio; Fresneda, Javier; Bucur, Ruxandra; Izquierdo, Ana; Vogler, Alfried P; Salgado, Jose M; Cieslak, Alexandra

doi:10.1186/1471-2148-10-29

BMC Ecology and Evolution

Table 3 Estimated rates of molecular evolution and ages of the constricted nodes, with confidence intervals.

From: Ancient origin of a Western Mediterranean radiation of subterranean beetles

		Beast, mitochondrial			Beast, *cox1*			r8s, *cox1*
		mean	lower	upper	mean	lower	upper	mean	lower	upper
	Rate	0.0099	0.0081	0.0116	0.0204	0.0151	0.0260	0.0115	0.0113	0.0117
1	root	44.16	37.46	50.76	45.41	35.87	56.03	39.62	.	.
2	Sardinian clade [ *cox1* ]	n.a.	n.a.	n.a.	32.75	28.96	36.76	33.00	.	.
3	Sardinian clade [mt]	37.79	33.86	41.84	37.92	31.43	45.43	36.92	.	.
4	infraflagellates	41.18	35.60	46.82	41.42	33.04	50.28	36.92	20.69	39.09
5	Speonomus group	33.61	27.67	39.82	36.32	27.53	46.23	30.45	22.81	32.50
6	Speonomidius group	18.51	13.70	23.69	22.67	14.37	31.31	20.70	.	.
7	Spelaeochlamys group	15.04	11.31	18.98	13.63	9.08	18.32	15.97	.	.
8	Quaestus group	29.20	24.06	34.37	30.54	23.03	37.94	31.11	.	.
9	node 1	17.59	13.39	22.12	17.56	11.00	24.23	18.02	.	.
10	node 2	24.16	19.47	29.12	23.59	17.29	30.58	21.88	.	.
11	node 3	22.59	18.03	27.23	22.41	16.46	29.04	21.88	.	.
12	node 4	19.40	14.64	24.47	22.34	14.69	30.32	20.80	.	.
13	node 5	27.94	22.95	33.34	31.46	23.39	39.90	26.94	.	.
14	node 6	21.18	17.06	25.63	23.29	17.00	29.94	21.24	.	.
15	node 7	25.08	20.71	29.89	26.95	20.28	34.18	25.08	.	.
16	node 8	21.22	17.28	25.37	21.44	16.06	27.29	19.63	.	.
17	Aranzadiella+Speocharidius	10.09	7.39	12.89	8.99	5.81	12.52	9.85	.	.
18	Euryspeonomus+Josettekia	18.27	14.20	22.89	18.07	12.62	24.29	18.92	.	.
19	Phacomorphus-Bellesia	16.18	12.76	19.75	16.70	11.83	21.73	15.84	.	.
20	Phacomorphus	5.70	4.11	7.37	5.71	3.63	7.88	4.83	.	.
21	Perriniella+Ceretophyes	14.72	10.86	18.65	17.93	12.00	24.12	17.37	.	.
22	Gesciella-Antrocharis	9.45	6.56	12.42	12.11	7.32	17.08	13.72	.	.
23	Speonomites	9.96	7.36	12.65	9.61	6.25	13.16	9.49	.	.
24	Gesciella-Stygiophyes	18.38	14.92	22.17	19.74	14.69	25.36	18.95	.	.
25	Speonomites-Stygiophyes	13.06	10.55	15.63	12.48	9.28	15.96	12.26	.	.
26	Stygiophyes-Speonomus	11.71	9.52	14.04	11.21	8.32	14.32	11.67	.	.
27	Speonomus	9.85	7.68	12.11	9.69	6.96	12.67	10.37	.	.
28	Stygiophyes-Troglocharinus	10.70	8.67	12.83	9.76	7.14	12.49	10.59	.	.
29	Stygiophyes-Salgadoia	7.85	6.18	9.59	7.67	5.46	10.11	8.61	.	.
30	Stygiophyes+Lagariella	5.63	4.32	7.10	5.55	3.70	7.48	6.48	.	.

See Fig. 3 & Additional file 5 for the definition of the nodes. In bold, nodes used for the calibration (see Methods).

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