Skip to main content

Table 1 Representatives of candidate fungal tRNase Zs used in sequence alignment

From: Identification and analysis of candidate fungal tRNA 3'-end processing endonucleases tRNase Zs, homologs of the putative prostate cancer susceptibility protein ELAC2

Species#

Taxonomy

Protein name

Form

Accession Number

Database

No. aa+

Ashbya gossypii (Ago)

Ascomycota

AgoTrz1

tRNase ZL

NP_984308

NCBI

821

Aspergillus nidulans (Ani)

Ascomycota

AniTrz1

tRNase ZL

ANID_11892.1

Broad

1083

Candida albicans (Cal)

Ascomycota

CalTrz1

tRNase ZL

XP_717703

NCBI

857

Coccidioides immitis (Cim)

Ascomycota

CimTrz1

tRNase ZL

CIHG_00067.1

Broad

962*

Fusarium graminearum (Fgr)

Ascomycota

FgrTrz1

tRNase ZL

FGSG_06635.3

Broad

840

Neurospora crassa (Ncr)

Ascomycota

NcrTrz1

tRNase ZL

NCU00232.4

Broad

1099

Pyrenophora tritici-repentis (Ptr)

Ascomycota

PtrTrz1

tRNase ZL

XP_001940780

NCBI

988*

Saccharomyces cerevisiae (Sce)

Ascomycota

SceTrz1

tRNase ZL

NP_013005

NCBI

838

Schizosaccharomyces pombe (Spo)

Ascomycota

SpoTrz1

tRNase ZL1

SPAC1D4.10

Broad

809

Schizosaccharomyces pombe (Spo)

Ascomycota

SpoTrz2

tRNase ZL2

SPBC3D6.03C

Broad

678

Sclerotinia sclerotiorum (Ssc)

Ascomycota

SscTrz1

tRNase ZL

XP_001586541

NCBI

832

Yarrowia lipolytica (Yli)

Ascomycota

YliTrz1

tRNase ZL

XP_500027

NCBI

815

Cryptococcus neoformans (Cne)

Basidiomycota

CneTrz1

tRNase ZL

CNBG_1589.2

Broad

1035

Malassezia globosa (Mgl)

Basidiomycota

MglTrz1

tRNase ZL

XP_001729151

NCBI

1109

Puccinia graminis (Pgr)

Basidiomycota

PgrTrz1

tRNase ZL

PGTG_11198.2

Broad

854

Spizellomyces punctatus (Spu)

Chytridiomycota

SpuTrz2

tRNase ZL

SPPG_00513.2

Broad

799*

Agaricus bisporus (Abi)

Basidiomycota

AbiTrz3

tRNase ZS

106812

JGI

376

Agaricus bisporus (Abi)

Basidiomycota

AbiTrz4

tRNase ZS

123256

JGI

469

Coprinopsis cinerea (Cci)

Basidiomycota

CciTrz2

tRNase ZS

CC1G_14603.2

Broad

390

Coprinopsis cinerea (Cci)

Basidiomycota

CciTrz3

tRNase ZS

CC1G_03806.2

Broad

544

Laccaria bicolor (Lbi)

Basidiomycota

LbiTrz2

tRNase ZS

XP_001876619

NCBI

406

Laccaria bicolor (Lbi)

Basidiomycota

LbiTrz3

tRNase ZS

XP_001874963

NCBI

476

Malassezia globosa (Mgl)

Basidiomycota

MglTrz2

tRNase ZS

EDP42443

NCBI

484*

Melampsora laricis-populina (Mla)

Basidiomycota

MlaTrz2

tRNase ZS

111950

JGI

473*

Postia placenta (Ppl)

Basidiomycota

PplTrz2

tRNase ZS

94043

JGI

386

Postia placenta (Ppl)

Basidiomycota

PplTrz3

tRNase ZS

92595

JGI

483*

Puccinia graminis (Pgr)

Basidiomycota

PgrTrz2

tRNase ZS

PGTG_13150.2

Broad

498

Spizellomyces punctatus (Spu)

Chytridiomycota

SpuTrz3

tRNase ZS

SPPG_06028.2

Broad

395

  1. #Species abbreviations used in this study are shown in parentheses.
  2. + The number of amino acids in fungal tRNase Zs
  3. * Indicates that mispredicted sequences obtained from the databases have been corrected.