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Table 2 Summary of human FOXI1 haplotypes

From: African signatures of recent positive selection in human FOXI1

 

1

2

3

4

5

6

7

8

10

11

13

14

16

17

21

22

    

Anc

G

T

C

T

A

A

A

T

G

C

C

A

A

A

C

-

Europe

Africa

Asia

Total

Ht-01

A

.

G

.

G

G

.

.

.

.

A

.

.

G

.

T

8

19

3

30

Ht-02

A

.

G

C

G

G

.

.

.

.

A

.

.

G

.

T

0

2

10

12

Ht-03

A

C

.

.

G

G

.

C

.

.

.

.

.

G

.

.

0

1

1

2

Ht-04

.

C

.

.

G

G

.

C

.

.

.

.

.

G

.

.

10

8

16

34

Ht-05

.

C

.

.

G

G

.

C

.

.

.

.

.

.

.

.

1

0

0

1

Ht-06

.

.

.

.

G

G

.

.

.

.

.

T

.

G

.

.

3

2

1

6

Ht-07

.

.

.

.

.

.

.

.

.

.

.

.

.

G

.

.

7

1

7

15

Ht-08

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

.

6

1

2

9

Ht-09

.

.

G

.

.

.

.

.

.

.

.

.

.

.

.

.

1

0

0

1

Ht-10

.

.

.

.

G

G

.

.

.

.

.

.

G

.

.

.

0

2

0

2

Ht-11

.

.

.

.

.

.

.

.

.

T

.

.

G

.

.

.

0

1

0

1

Ht-12

.

.

.

.

.

.

.

.

A

T

.

.

G

.

.

.

0

1

0

1

Ht-13

.

.

.

.

.

.

G

.

.

T

.

.

G

.

.

.

1

1

0

2

Ht-14

.

.

.

.

.

.

G

.

.

T

.

.

G

.

T

.

3

0

0

3

Ht-15

A

.

G

.

G

G

.

.

A

T

.

.

G

.

.

.

0

1

0

1

  1. Note: Each polymorphic variant is displayed below the corresponding ancestral position. Ancestral-like alleles are indicated with dots.