Table 1 Ferlin protein sequences used in this study.
From: Phylogenetic analysis of ferlin genes reveals ancient eukaryotic origins
Species | Species Abbreviation | Common Name | Source | Accession |
|---|---|---|---|---|
Non-Metazoans | Â | Â | Â | Â |
Apicomplexa | Â | Â | Â | Â |
Plasmodium falciparum | Pfal | Malaria parasite | Genbank | CAX64098 |
Cryptosporidium parvum | Cpar | Â | Uniprot | Q5CS58, Q5CVS8 |
Haptophyta | Â | Â | Â | Â |
Emiliania huxleyi | Ehux | Phytoplankton | DOE JGI | Emihu1:464146 |
Viridiplantae | Â | Â | Â | Â |
Ostreococcus tauri | Otau | Â | Uniprot | Q01FJ7 |
Metazoans | Â | Â | Â | Â |
Cnidaria | Â | Â | Â | Â |
Nematostella vectensis | Nvec | Sea anemone | Genbank | XP_001635151, XP_001628928 |
Placozoa | Â | Â | Â | Â |
Trichoplax adhaerens | Tadh | Â | Genbank | EDV22852, EDV22851, EDV23443 |
Annelida (Segmented worms) | Â | Â | Â | Â |
Capitella sp. I | Ccap | Segmented worm | DOE JGI | Capca1:169002, Capca1:184805 |
Mollusca | Â | Â | Â | Â |
Lottia gigantea | Lgig | Gastropod snail | DOE JGI | Lotgi1:223003, Lotgi1:125050 |
Platyhelminthes (Flat worms) | Â | Â | Â | Â |
Schistosoma mansoni | Sman | Flat worm | UniProt | C4Q6T8, C4QI48 |
Nematoda (Round worms) | Â | Â | Â | Â |
Brugia malayi | Bmal | Round worm | UniProt | A8QEP1 |
Caenorhabditis elegans | Cele | Round worm | UniProt | Q17388, O01596 |
Arthropoda | Â | Â | Â | Â |
Pediculus humanus corporis | Phum | Body lice | Genbank | XP_002430476 |
Tribolium castaneum | Tcas | Beetle | Genbank | XP_968595 |
Acyrthosiphon pisum | Apis | Pea Aphid | Genbank | XP_001949781 |
Drosophila melanogaster | Dmel | Fruit Fly | Genbank | NP_001137919 (Misfire isoform F) |
Culex pipiens quinquefasciatus | Cqui | Mosquito | Genbank | XP_001858804 |
Chordata | Â | Â | Â | Â |
Strongylocentrotus purpuratus | Spur | Sea urchin | Genbank | XP_001197550, XP_001194793, XP_001199804 |
Branchiostoma floridae | Bflo | Lancelet | UniProt | C3Y3S6, C3XZR5, C3YBJ8 |
Petromyzon marinus | Pmar | Lamprey | WUGSC | Contig10491, Contig10569 |
Callorhinchus milii | Cmil | Shark | A*STAR | AAVX01058092, AAVX01535036, AAVX01036594, AAVX01262173, AAVX01071336 |
Danio rerio | Drer | Zebra fish | Genbank/Uniprot | XP_689416, Q5SPC5, XP_687465, XP_001922278, XP_001923096, XP_001919573 |
Mus musculus | Mmus | Mouse | Genbank/Uniprot | Q9ESD7, Q9ESF1, Q69ZN7, A3KGK3.3, *, XP_982409 |
Homo sapiens | Hsap | Human | UniProt | O75923, Q9HC10, Q9NZM1, A9Z1Z3, A0AVI2, Q2WGJ9 |