Microsatellite phylogeny of chamois. Neighbor-Joining tree based on allele-sharing distance from 20 microsatellite genotypes of 179 Rupicapra individuals. Tip labels contain the unique individual identifier that includes the sampling site in the form of a capital-letter code (as depicted in Figure 1). Colours indicate the recognized subspecies as in Figure 1. Clade μsatW, Clade μsatC and Clade μsatE indicate the three major nuclear lineages in black, grey and white. Coloured circles in black, grey and white indicate the affiliation of individuals to mitochondrial Clades mtW, mtC and mtE.