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Table 1 ROCO Kinase Domain CDD Hits

From: A phylogenetic survey of myotubularin genes of eukaryotes: distribution, protein structure, evolution, and gene expression

Query Sequence NCBI CDD Hits E values
EHI_137960 cd00180, S_TKc
cd00192, PTKc
4.00E-35
2.00E-32
EHI_151670 cd00192, PTKc
cd00180, S_TKc
8.00E-38
1.00E-29
EHI_135010 cd00192, PTKc
cd00180, S_TKc
5.00E-33
7.00E-28
EHI_048230 cd00180, S_TKc
cd00192, PTKc
1.00E-28
5.00E-26
EHI_107230 cd00192, PTKc
cd00180, S_TKc
1.00E-35
2.00E-26
EHI_185230 cd00180, S_TKc
cd00192, PTKc
8.00E-34
3.00E-32
EHI_078170 cd00192, PTKc
cd00180, S_TKc
7.00E-37
1.00E-31
EHI_141820 cd00192, PTKc
cd00180, S_TKc
1.00E-45
3.00E-41
EHI_197200 cd00192, PTKc
cd00180, S_TKc
2.00E-35
3.00E-31
DDB0191503 cd00192, PTKc
cd00180, S_TKc
2.00E-52
1.00E-38
DDB0191512 cd00192, PTKc
cd00180, S_TKc
3.00E-40
3.00E-38
HuLRRK2 cd00180, S_TKc
cd00192, PTKc
3.00E-38
5.00E-36
HuPKAalpha1 cd00180, S_TKc
cd00192, PTKc
3.00E-82
3.00E-22
SRC_Hu cd00192, PTKc
cd00180, S_TKc
3.00E-104
9.00E-51
  1. Myotubularin homologue sequences were identified, and protein kinase domains identified, as described in Methods. Protein kinase domains were subjected to analysis at NCBI CDD [40, 41]. This table summarizes the returns for those searches - the query sequences, the hit models, and E values. Models: cd00180, S_TKc (Serine/Threonine protein kinases, catalytic domain); cd00192, PTKc (Catalytic Domain of Protein Tyrosine Kinases).