From: Positive selection of HIV host factors and the evolution of lentivirus genes
 | rank | relative evol. rate | interacting genes | % genes under positive selection | mean norm. site-based rank | mean norm. sliding window rank |
---|---|---|---|---|---|---|
gp120 | 1 | 4.36 | 434 | 12.9 | 0.452 | 0.481(+) |
Vpu | 2 | 3.82 | 22 | 18.2 | 0.292 | 0.520 |
Env | 3 | 3.06 | 145 | 15.9 | 0.448 | 0.497(+) |
p6 | 4 | 2.43 | 12 | 16.7 | 0.258 | 0.681 |
Rev | 5 | 2.21 | 59 | 6.8 | 0.737(-) | 0.757(-) |
gp41 | 6 | 2.07 | 123 | 16.3 | 0.427 | 0.488(+) |
Nef | 7 | 2.02 | 168 | 12.5 | 0.432 | 0.526 |
Gag | 8 | 1.87 | 45 | 13.3 | 0.105(+) | 0.615 |
Vif | 9 | 1.77 | 55 | 16.4 | 0.350 | 0.659(-) |
Tat | 10 | 1.77 | 636 | 11.0 | 0.522 | 0.606 |
MA | 11 | 1.70 | 69 | 7.2 | 0.542 | 0.742(-) |
NC | 12 | 1.60 | 19 | 15.8 | 0.416 | 0.759(-) |
Vpr | 13 | 1.58 | 152 | 11.2 | 0.647(-) | 0.614 |
RT | 14 | 1.42 | 33 | 9.1 | 0.606 | 0.621 |
Pol | 15 | 1.38 | 1 | 100.0 | 0.190 | 0.094 |
CA | 16 | 1.37 | 21 | 28.6 | 0.235 | 0.373(+) |
PR | 17 | 1.30 | 71 | 21.1 | 0.709(-) | 0.629(-) |
IN | 18 | 1.00 | 66 | 7.6 | 0.729(-) | 0.727(-) |