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Table 4 Rescaled ML estimates and 90% posterior density intervals (HPD) of demographic parameters for three population pairs

From: Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice

Population Pair

N e1 a

N e2 a

N eA b

t c

BHA1-ausd

2,472

(1,483 - 4,450)

5,439

(2,472 - 12,854)

77,148

(4,3013 - 166,613)

9,939

(3,975 - 27,829)

SH-indicad

1,000

(299 - 1,897)

15,978

(9,487 - 30,458)

74,397

(36,548 - 244,662*)

31,955

(9,986 -81,887)

aus-indica d

4,536

(2,016 - 11,592)

13,102

(4,535 -19,653)

43,341

(20,157 -246,922)

6,047

(605 - 241,880)

  1. a Effective population size (Ne) in order listed (i.e. BHA1 is Ne1 and aus is Ne2) reported as number of individuals; numbers in parenthesis represent the 90% posterior density intervals.
  2. b Ancestral population effective population size; numbers in parenthesis represent the 90% posterior density intervals.
  3. c Population split times in years. Numbers in parenthesis represent 90% posterior density intervals. Asterisks indicate posterior density intervals that exceed maximum priors for the parameter.
  4. d Number of loci used in analysis: BHA1-aus 27; SH-indica 28; aus-indica 32
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BMC Ecology and Evolution

ISSN: 2730-7182

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