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Table 4 Rescaled ML estimates and 90% posterior density intervals (HPD) of demographic parameters for three population pairs

From: Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice

Population Pair N e1 a N e2 a N eA b t c
BHA1-ausd 2,472
(1,483 - 4,450)
5,439
(2,472 - 12,854)
77,148
(4,3013 - 166,613)
9,939
(3,975 - 27,829)
SH-indicad 1,000
(299 - 1,897)
15,978
(9,487 - 30,458)
74,397
(36,548 - 244,662*)
31,955
(9,986 -81,887)
aus-indica d 4,536
(2,016 - 11,592)
13,102
(4,535 -19,653)
43,341
(20,157 -246,922)
6,047
(605 - 241,880)
  1. a Effective population size (Ne) in order listed (i.e. BHA1 is Ne1 and aus is Ne2) reported as number of individuals; numbers in parenthesis represent the 90% posterior density intervals.
  2. b Ancestral population effective population size; numbers in parenthesis represent the 90% posterior density intervals.
  3. c Population split times in years. Numbers in parenthesis represent 90% posterior density intervals. Asterisks indicate posterior density intervals that exceed maximum priors for the parameter.
  4. d Number of loci used in analysis: BHA1-aus 27; SH-indica 28; aus-indica 32