Table 2 Sequence and location of all primers used to amplify parts of the mitochondrial genome
From: Concerted evolution of duplicated mitochondrial control regions in three related seabird species
Primer | Location | Sequence | Source |
|---|---|---|---|
b2 | 5' end of cytochrome b | 5'-GCCCCTCAGAATGATATTTGTCCTCA-3' | 1 |
b3 | middle of cytochrome b | 5'-GGACGAGGCTTTTACTACGGCTC-3' | 2 |
b4 | middle of cytochrome b | 5'-TTGCTGGGGTGAAGTTTTCTGGGTC-3' | 2 |
b5 | 3' end of cytochrome b | 5'-TTCCACCCCTACTTCTCACTAAAAGA-3' | 2 |
cytb-endL | 3' end of cytochrome b | 5'-TATCATCGGCCAACTAGCC-3' | 3 |
b6 | tRNA-Threonine | 5'-GTCTTCAGTTTTTGGTTTACAAGAC-3' | 2 |
16363H | 5' end of ND6 | 5'-GTTGTGACCGTTGATAGTG-3' | 3 |
ND616363 | 5' end of ND6 | 5'-CACTATCAACGGTCACAAC-3' | 3 |
tGlu-boobyH | tRNA-Glutamic Acid | 5'-ACAACGGCGGCATTTCAGGCC-3' | 3 |
SsMCR-L143B | 5' end of CR1 | 5'-ATTGCACATTARATTTASCT-3' | 3 |
SsMCR-H170B | 5' end of CR1 | 5'-ATGAAAGTATTATGTGATCC-3' | 3 |
SlMCR-L160B | 5' end of CR1 | 5'-ATCCACATTGCACATTAAGT-3' | 3 |
SlMCR-H171B | 5' end of CR1 | 5'-CATCAATTTACATATGTCGAC-3' | 3 |
SdMCR-H750 | middle of CR1 and CR2 | 5'-GGGAACCAAAAGAGGAAAACC-3' | 4 |
SlMCR-L740 | middle of CR1 and CR2 | 5'-GCATAGGAAGTACTTACAATCTAGG-3' | 3 |
SsMCR-L143A | 5' end of CR2 | 5'-ATTGCACATTARATTTAYTC-3' | 3 |
SsMCR-L143A2 | 5' end of CR2 | 5'-ATTGCACATTAAATTTAGTC-3' | 3 |
SsMCR-H169A | 5' end of CR2 | 5'-TGAAAGTATACAGTCCATTG-3' | 3 |
SlMCR-L160A | 5' end of CR2 | 5'-ATCCACATTGCACATTTAAA-3' | 3 |
SlMCR-H194A | 5' end of CR2 | 5'-CAGTGGTATGTGTTTGTC-3' | 3 |
12SH1301 | 5' end of 12SrRNA | 5'-GGTAAGGTTAGGACTAAGTC-3' | 3 |