Skip to main content

Table 2 List of wild and cultivated rice genotypes used in our study

From: Potential of (GATA)n microsatellites from rice for inter- and intra-specific variability studies

No.

List of samples used

Accession

Genome

Origin

Number of alleles

Total

     

obtained with

number

     

OS1A6

OS1H10

OS2E7

of alleles

1

O. glaberrima

TOG 6216

AA

Africa Via Warda

1

2

-

3

2

O. glaberrima

TOG-6229

AA

Africa Via Warda

1

3

-

4

3

O. longistaminata

-

AA

Africa Via CRRI

2

2

-

4

4

O. perennis

104823

AA

Thailand

1

2

-

3

5

O. rufipogon

106424

AA

Vietnam

2

1

-

3

6

O. rufipogon

105908

AA

Thailand

1

1

-

2

7

O. punctata (2n)

105980

BB

Cameroon

1

2

-

3

8

O. punctata (4n)

100884

BBCC

India

1

2

-

3

9

O. minuta

101141

BBCC

Philippines

1

3

-

4

10

O. minuta

101125

BBCC

Philippines

1

1

-

2

11

O. rhizomatis

105432

CC

Sri-Lanka

1

2

-

3

12

O. officinalis

100896

CC

Thailand

1

1

-

2

13

O. officinalis

101399

CC

Vietnam

1

0

-

1

14

O. alta

105143

CCDD

Guyana

1

1

-

2

15

O. grandiglumis

105669

CCDD

Brazil

1

1

-

2

16

O. latifolia

100167

CCDD

Costa Rica

1

0

-

1

17

O. latifola

100965

CCDD

Costa Rica

1

2

-

3

18

O. australiensis

100882

EE

Australia Via CRRI

1

0

-

1

19

O. australiensis

T-1434

EE

Australia Via CRRI

1

2

-

3

20

O. brachyantha

101232

FF

Sierra Leone

1

0

-

1

21

O. brachyantha

B98-8025

FF

Africa

1

0

-

1

22

O. granulata

104986

GG

Via CRRI India

1

1

-

2

23

O. granulata

106448

GG

Nepal

1

7

-

8

24

O. longiglumis

105148

HHJJ

Indonesia

0

0

-

0

25

O. ridleyi

100821

HHJJ

Thailand

1

1

-

2

26

O. ridleyi

101453

HHJJ

Malaysia

1

2

-

3

27

O. nivara

-

AA

India

2

2

-

4

28

O. malampuzhaensis

-

BBCC

India

1

0

-

1

29

O. sativa cultivars

-

-

     

30

IR 36

Indica

AA

Cultivated variety

1

2

1

3

31

IR 64

Indica

AA

Cultivated variety

1

1

-

2

32

BG-90-2

Indica

AA

Cultivated variety

1

2

1

3

33

Basmati 370

Aromatic rice

AA

Cultivated variety

1

1

1

2

34

Azucena

Japonica

AA

Cultivated variety

1

0

-

1

35

Indrayani

Indica

AA

Cultivated variety

1

2

-

3

36

Ambemohr

Indica

AA

Cultivated variety

1

1

3

2

37

Intan

Indonesian

AA

Cultivated variety

1

1

2

2

38

Khadkya

Indica

AA

Maharashtra India

2

1

4

3

39

Waseas

Japonica

AA

Cultivated variety

1

0

-

1

40

Hakkoda

Japonica

AA

Cultivated variety

1

1

-

2

41

Porteresia coarctata

Related

Unknown

Bangladesh

1

3

4

4

42

Leersia

Related

Unknown

Madagascar

1

0

-

1

43

Rhynchoryza subulata

Related

-

Argentina

1

1

-

2

44

Zea diploperensis

-

-

 

1

2

-

3

45

Triticum durum landrace

1633

-

 

-

2

-

2

 

Narsimgarh III

       

46

Hordeum marinum

PI 200341

-

 

-

1

-

1

47

Avena vaviloviana

PI 412733

-

 

-

3

-

3