From: Potential of (GATA)n microsatellites from rice for inter- and intra-specific variability studies
No. | List of samples used | Accession | Genome | Origin | Number of alleles | Total | ||
---|---|---|---|---|---|---|---|---|
 |  |  |  |  | obtained with | number | ||
 |  |  |  |  | OS1A6 | OS1H10 | OS2E7 | of alleles |
1 | O. glaberrima | TOG 6216 | AA | Africa Via Warda | 1 | 2 | - | 3 |
2 | O. glaberrima | TOG-6229 | AA | Africa Via Warda | 1 | 3 | - | 4 |
3 | O. longistaminata | - | AA | Africa Via CRRI | 2 | 2 | - | 4 |
4 | O. perennis | 104823 | AA | Thailand | 1 | 2 | - | 3 |
5 | O. rufipogon | 106424 | AA | Vietnam | 2 | 1 | - | 3 |
6 | O. rufipogon | 105908 | AA | Thailand | 1 | 1 | - | 2 |
7 | O. punctata (2n) | 105980 | BB | Cameroon | 1 | 2 | - | 3 |
8 | O. punctata (4n) | 100884 | BBCC | India | 1 | 2 | - | 3 |
9 | O. minuta | 101141 | BBCC | Philippines | 1 | 3 | - | 4 |
10 | O. minuta | 101125 | BBCC | Philippines | 1 | 1 | - | 2 |
11 | O. rhizomatis | 105432 | CC | Sri-Lanka | 1 | 2 | - | 3 |
12 | O. officinalis | 100896 | CC | Thailand | 1 | 1 | - | 2 |
13 | O. officinalis | 101399 | CC | Vietnam | 1 | 0 | - | 1 |
14 | O. alta | 105143 | CCDD | Guyana | 1 | 1 | - | 2 |
15 | O. grandiglumis | 105669 | CCDD | Brazil | 1 | 1 | - | 2 |
16 | O. latifolia | 100167 | CCDD | Costa Rica | 1 | 0 | - | 1 |
17 | O. latifola | 100965 | CCDD | Costa Rica | 1 | 2 | - | 3 |
18 | O. australiensis | 100882 | EE | Australia Via CRRI | 1 | 0 | - | 1 |
19 | O. australiensis | T-1434 | EE | Australia Via CRRI | 1 | 2 | - | 3 |
20 | O. brachyantha | 101232 | FF | Sierra Leone | 1 | 0 | - | 1 |
21 | O. brachyantha | B98-8025 | FF | Africa | 1 | 0 | - | 1 |
22 | O. granulata | 104986 | GG | Via CRRI India | 1 | 1 | - | 2 |
23 | O. granulata | 106448 | GG | Nepal | 1 | 7 | - | 8 |
24 | O. longiglumis | 105148 | HHJJ | Indonesia | 0 | 0 | - | 0 |
25 | O. ridleyi | 100821 | HHJJ | Thailand | 1 | 1 | - | 2 |
26 | O. ridleyi | 101453 | HHJJ | Malaysia | 1 | 2 | - | 3 |
27 | O. nivara | - | AA | India | 2 | 2 | - | 4 |
28 | O. malampuzhaensis | - | BBCC | India | 1 | 0 | - | 1 |
29 | O. sativa cultivars | - | - | Â | Â | Â | Â | Â |
30 | IR 36 | Indica | AA | Cultivated variety | 1 | 2 | 1 | 3 |
31 | IR 64 | Indica | AA | Cultivated variety | 1 | 1 | - | 2 |
32 | BG-90-2 | Indica | AA | Cultivated variety | 1 | 2 | 1 | 3 |
33 | Basmati 370 | Aromatic rice | AA | Cultivated variety | 1 | 1 | 1 | 2 |
34 | Azucena | Japonica | AA | Cultivated variety | 1 | 0 | - | 1 |
35 | Indrayani | Indica | AA | Cultivated variety | 1 | 2 | - | 3 |
36 | Ambemohr | Indica | AA | Cultivated variety | 1 | 1 | 3 | 2 |
37 | Intan | Indonesian | AA | Cultivated variety | 1 | 1 | 2 | 2 |
38 | Khadkya | Indica | AA | Maharashtra India | 2 | 1 | 4 | 3 |
39 | Waseas | Japonica | AA | Cultivated variety | 1 | 0 | - | 1 |
40 | Hakkoda | Japonica | AA | Cultivated variety | 1 | 1 | - | 2 |
41 | Porteresia coarctata | Related | Unknown | Bangladesh | 1 | 3 | 4 | 4 |
42 | Leersia | Related | Unknown | Madagascar | 1 | 0 | - | 1 |
43 | Rhynchoryza subulata | Related | - | Argentina | 1 | 1 | - | 2 |
44 | Zea diploperensis | - | - | Â | 1 | 2 | - | 3 |
45 | Triticum durum landrace | 1633 | - | Â | - | 2 | - | 2 |
 | Narsimgarh III |  |  |  |  |  |  |  |
46 | Hordeum marinum | PI 200341 | - | Â | - | 1 | - | 1 |
47 | Avena vaviloviana | PI 412733 | - | Â | - | 3 | - | 3 |